Publications

2022

Alhousami T, Diny M, Ali F, Shin J, Kumar G, Kumar V, Campbell J, Noonan V, Hanna G, Denis G, Monti S, Kukuuzinska, Varelas X, and Bais M. Inhibition of LSD1 Attenuates Oral Cancer Development and Promotes Therapeutic Efficacy of Immune Checkpoint Blockade and YAP/TAZ Inhibition. Molecular Cancer Research, 2022, 20(5): 712-721. Read

Das, S. L., Sutherland, B. P., Lejeune, E., Eyckmans, J., & Chen, C. S. (2022). Mechanical response of cardiac microtissues to acute localized injury. American Journal of Physiology-Heart and Circulatory Physiology, 323(4), H738–H748. Read

Michas, C., Karakan, M. Ç., Nautiyal, P., Seidman, J. G., Seidman, C. E., Agarwal, A., Ekinci, K., Eyckmans, J., White, A. E., & Chen, C. S. (2022). Engineering a living cardiac pump on a chip using high-precision fabrication. Science Advances, 8(16). Read

Smith, Q., Bays, J., Li, L., Shareef, H., Chen, C. S., & Bhatia, S. N. (2022). Directing Cholangiocyte Morphogenesis in Natural Biomaterial Scaffolds. Advanced Science, 9(3), 2102698. Read

Sundaram, S., & Chen, C. S. (2022). Next-generation engineered microsystems for cell biology: A systems-level roadmap. Trends in Cell Biology, 2022, 32(6):490-500. Read

Tefft, J. B., Bays, J. L., Lammers, A., Kim, S., Eyckmans, J., & Chen, C. S. (2022). Notch1 and Notch3 coordinate for pericyte-induced stabilization of vasculature. American Journal of Physiology-Cell Physiology, 322(2), C185–C196. Read

Tiemeijer, L. A., Ristori, T., Stassen, O. M., Ahlberg, J. J., de Bijl, J. J., Chen, C. S., Bentley, K., Bouten, C. V., & Sahlgren, C. M. (2022). Engineered patterns of Notch ligands Jag1 and Dll4 elicit differential spatial control of endothelial sprouting. Iscience, 25(5), 104306. Read

Liang, Dongyue, Juan Liu, Hendrik Heinz, Sara E. Mason, Robert J. Hamers, and Qiang Cui. “Binding of Polar and Hydrophobic Molecules at the LiCoO 2 (001)-Water Interface: Force Field Development and Molecular Dynamics Simulations.” Nanoscale 14, no. 18 (2022): 7003–14. Read

Courtney, K. C., Mandal, T., Li, Y., Mehta, N., Das, D., Cui, Q., & Chapman, E. R. (2022). Synaptotagmin 7 outperforms synaptotagmin 1 to open and stabilize nascent fusion pores via robust membrane penetration. BioRxiv, 2022–07. Read

Courtney, K. C., Wu, L., Mandal, T., Swift, M., Zhang, Z., Alaghemandi, M., Wu, Z., Bradberry, M. M., Deo, C., & Lavis, L. D. (2022). The complexin C-terminal amphipathic helix stabilizes the fusion pore open state by sculpting membranes. Nature Structural & Molecular Biology, 29(2), 97–107. Read

Demapan, D., Kussmann, J., Ochsenfeld, C., & Cui, Q. (2022). Factors that determine the variation of equilibrium and kinetic properties of QM/MM enzyme simulations: QM region, conformation, and boundary condition. Journal of Chemical Theory and Computation, 18(4), 2530–2542. Read

Deng, J., & Cui, Q. (2022). Electronic Polarization Is Essential for the Stabilization and Dynamics of Buried Ion Pairs in Staphylococcal Nuclease Mutants. Journal of the American Chemical Society, 144(10), 4594–4610. Read

Dong, Y., Fu, L., Song, J., Zhang, S., Li, X., Fang, W., Cui, Q., & Gao, L. (2022). Thermodynamic Driving Forces for Divalent Cations Binding to Zwitterionic Phospholipid Membranes. The Journal of Physical Chemistry Letters, 13(48), 11237–11244. Read

Lai, R., & Cui, Q. (2022). How to Stabilize Carbenes in Enzyme Active Sites without Metal Ions. Journal of the American Chemical Society, 144(45), 20739–20751. Read

Leander, M., Liu, Z., Cui, Q., & Raman, S. (2022). Deep mutational scanning and machine learning reveal structural and molecular rules governing allosteric hotspots in homologous proteins. Elife, 11, e79932. Read

Lewis, D. K., Oh, Y., Mohanam, L. N., Wierzbicki, M., Ing, N. L., Gu, L., Hochbaum, A., Wu, R., Cui, Q., & Sharifzadeh, S. (2022). Electronic Structure of de Novo Peptide ACC-Hex from First Principles. The Journal of Physical Chemistry B, 126(23), 4289–4298. Read

Liang, D., Liu, J., Heinz, H., Mason, S. E., Hamers, R. J., & Cui, Q. (2022). Binding of polar and hydrophobic molecules at the LiCoO 2 (001)-water interface: Force field development and molecular dynamics simulations. Nanoscale, 14(18), 7003–7014. Read

Liu, Z., Yethiraj, A., & Cui, Q. (2022). Membrane Obstacles Enhance the Sensitivity and Selectivity of Surface Condensation. BioRxiv, 2022–07. Read

Mondal, S., & Cui, Q. (2022). Coacervation of poly-electrolytes in the presence of lipid bilayers: Mutual alteration of structure and morphology. Chemical Science, 13(26), 7933–7946. Read

Paul, S., Audhya, A., & Cui, Q. (2022). Molecular mechanism of GTP binding-and dimerization-induced enhancement of Sar1-mediated membrane remodeling. BioRxiv, 2022–07. Read

Piskulich, Z. A., & Cui, Q. (2022). Machine Learning-Assisted Phase Transition Temperatures from Generalized Replica Exchange Simulations of Dry Martini Lipid Bilayers. The Journal of Physical Chemistry Letters, 13(28), 6481–6486. Read

Tran, N., Oh, Y., Sutherland, M., Cui, Q., & Hong, M. (2022). Cholesterol-Mediated Clustering of the HIV Fusion Protein gp41 in Lipid Bilayers. Journal of Molecular Biology, 434(2), 167345. Read

Xiong, Y., Zeng, J., Xia, F., Cui, Q., Deng, X., & Xu, X. (2022). Conformations and binding pockets of HRas and its guanine nucleotide exchange factors complexes in the guanosine triphosphate exchange process. Journal of Computational Chemistry, 43(13), 906–916. Read

Yao, X., Wang, Y., Li, F., Dalluge, J. J., Orr, G., Hernandez, R., Cui, Q., & Haynes, C. L. (2022). Unconventional aliphatic fluorophores discovered as the luminescence origin in citric acid–urea carbon dots. Nanoscale, 14(26), 9516–9525. Read

Yuan, Y., Deng, J., & Cui, Q. (2022). Molecular dynamics simulations establish the molecular basis for the broad allostery hotspot distributions in the tetracycline repressor. Journal of the American Chemical Society, 144(24), 10870–10887. Read

Zeng, J., Chen, J., Xia, F., Cui, Q., Deng, X., & Xu, X. (2022). Identification of functional substates of KRas during GTP hydrolysis with enhanced sampling simulations. Physical Chemistry Chemical Physics, 24(13), 7653–7665. Read

Group, B. P. R., Beck, R. W., Russell, S. J., Damiano, E. R., El-Khatib, F. H., Ruedy, K. J., Balliro, C., Li, Z., & Calhoun, P. (2022). A multicenter randomized trial evaluating fast-acting insulin aspart in the bionic pancreas in adults with type 1 diabetes. Diabetes Technology & Therapeutics, 24(10), 681–696. Read

Group, B. P. R., Kruger, D., Kass, A., Lonier, J., Pettus, J., Raskin, P., Salam, M., Trikudanathan, S., Zhou, K., & Russell, S. J. (2022). A multicenter randomized trial evaluating the insulin-only configuration of the bionic pancreas in adults with type 1 diabetes. Diabetes Technology & Therapeutics, 24(10), 697–711. Read

Group, B. P. R., Messer, L. H., Buckingham, B. A., Cogen, F., Daniels, M., Forlenza, G., Jafri, R. Z., Mauras, N., Muir, A., & Wadwa, R. P. (2022). Positive impact of the bionic pancreas on diabetes control in youth 6–17 years old with type 1 diabetes: A multicenter randomized trial. Diabetes Technology & Therapeutics, 24(10), 712–725. Read

Messer, L. H., Buckingham, B. A., Cogen, F., Daniels, M., Forlenza, G. P., Jafri, R., Mauras, N., Muir, A., Wadwa, R. P., & White, P. (2022). WITHDRAWN: Positive Impact of the Bionic Pancreas on Diabetes Control in Youth 6-17 Years Old with Type 1 Diabetes: A Multicenter Randomized Trial. Diabetes Technology and Therapeutics, ja. Read

Karantanou, C., Minciacchi, V. R., Kumar, R., Zanetti, C., Bravo, J., Pereira, R. S., Tascher, G., Tertel, T., Covarrubias-Pinto, A., & Bankov, K. (2022). Impact of mesenchymal stromal cell-derived vesicular cargo on B-cell acute lymphoblastic leukemia progression. Blood Advances. Read

Chen, C. S., Bhatia, S. N., Li, L., Yang, J., & Eyckmans, J. (2022). Synthetic heparin mimetics and uses thereof (United States Patent No. US20220143272A1). Read

Studenic, P., Felson, D. T., de Wit, M., Smolen, J. S., & Aletaha, D. (2022). Response to:‘Increasing the threshold for patient global assessment in defining remission may have a different impact in patients with early and established rheumatoid arthritis’ by Bugatti et al. Annals of the Rheumatic Diseases, 81(4), e56–e56. Read

Wallace, I. J., Felson, D. T., Worthington, S., & Lieberman, D. E. (2022). Response to:‘Is non-industrial society undergoing an energy balance transition predisposed to accumulate abdominal adipose tissue and susceptible to knee osteoarthritis?’by Yu et al. Annals of the Rheumatic Diseases, 81(4), e64–e64. Read

Abood, A., Mesner, L., Rosenow, W., Al-Barghouthi, B. M., Horowitz, N., Morgan, E. F., Gerstenfeld, L. C., & Farber, C. R. (2022). Identification of Known and Novel Long Noncoding RNAs Potentially Responsible for the Effects of Bone Mineral Density (BMD) Genomewide Association Study (GWAS) Loci. Journal of Bone and Mineral Research, 37(8), 1500–1510. Read

Al-Barghouthi, B. M., Rosenow, W. T., Du, K.-P., Heo, J., Maynard, R., Mesner, L., Calabrese, G., Nakasone, A., Senwar, B., Gerstenfeld, L., Larner, J., Ferguson, V., Ackert-Bicknell, C., Morgan, E., Brautigan, D., & Farber, C. R. (2022). Transcriptome-wide association study and eQTL colocalization identify potentially causal genes responsible for human bone mineral density GWAS associations. ELife, 11, e77285. Read

Auger, J. D., Naik, A. J., Murakami, A. M., Gerstenfeld, L. C., & Morgan, E. F. (2022). Spatial assessment of femoral neck bone density and microstructure in hip osteoarthritis. Bone Reports, 16, 101155.Read

Bragdon, B. C., Bennie, A., Molinelli, A., Liu, Y., & Gerstenfeld, L. C. (2022). Post natal expression of Prx1 labels appendicular restricted progenitor cell populations of multiple tissues. Journal of Cellular Physiology, 237(5), 2550–2560. Read

Nakasone, A., Guang, Y., Wise, A., Kim, L., Babbin, J., Rathod, S., Mitchell, A. J., Gerstenfeld, L. C., & Morgan, E. F. (2022). Structural features of subchondral bone cysts and adjacent tissues in hip osteoarthritis. Osteoarthritis and Cartilage, 30(8), 1130–1139. Read

Al Subeh, Z. Y., Poschel, D. B., Redd, P. S., Klement, J. D., Merting, A. D., Yang, D., Mehta, M., Shi, H., Colson, Y. L., Oberlies, N. H., Pearce, C. J., Colby, A. H., Grinstaff, M. W., & Liu, K. (2022). Lipid Nanoparticle Delivery of Fas Plasmid Restores Fas Expression to Suppress Melanoma Growth In Vivo. ACS Nano, 16(8), 12695–12710. https://doi.org/10.1021/acsnano.2c04420

Blessing, W. A., Digesu, C. S., Liu, R., Mahvi, D. A., Tal-mason, A., Kumar, A., Hachey, K. J., Colby, A. H., Korunes-Miller, J. T., Agar, N., Regan, M. S., Shih, A., Raut, C. P., Grinstaff, M. W., & Colson, Y. L. (2022). Sustained Supratherapeutic Paclitaxel Delivery Enhances Irreversible Sarcoma Cell Death. Molecular Cancer Therapeutics, 21(11), 1663–1673. https://doi.org/10.1158/1535-7163.MCT-21-0750

Bressler, E. M., Chu, N.-Q., Sabatelle, R. C., Mahvi, D. A., Korunes-Miller, J. T., Nagashima, F., Ichinose, F., Liu, R., Grinstaff, M. W., Colson, Y. L., & Raut, C. P. (2022). Doxorubicin-Loaded Polymeric Meshes Prevent Local Recurrence after Sarcoma Resection While Avoiding Cardiotoxicity. Cancer Research, 82(23), 4474–4484. https://doi.org/10.1158/0008-5472.CAN-22-0734

Cheng, R., C. Weitz, A., Paris, J., Tang, Y., Zhang, J., Song, H., Naowarojna, N., Li, K., Qiao, L., Lopez, J., W. Grinstaff, M., Zhang, L., Guo, Y., Elliott, S., & Liu, P. (2022). OvoA Mtht from Methyloversatilis thermotolerans ovothiol biosynthesis is a bifunction enzyme: Thiol oxygenase and sulfoxide synthase activities. Chemical Science, 13(12), 3589–3598. https://doi.org/10.1039/D1SC05479A

Cook, K. A., Martinez-Lozano, E., Sheridan, R., Rodriguez, E. K., Nazarian, A., & Grinstaff, M. W. (2022). Hydrogels for the management of second-degree burns: Currently available options and future promise. Burns & Trauma, 10, tkac047. https://doi.org/10.1093/burnst/tkac047

Grazon, C., Chern, M., Lally, P., C. Baer, R., Fan, A., Lecommandoux, S., Klapperich, C., M. Dennis, A., E. Galagan, J., & W. Grinstaff, M. (2022). The quantum dot vs. organic dye conundrum for ratiometric FRET-based biosensors: Which one would you chose? Chemical Science, 13(22), 6715–6731. https://doi.org/10.1039/D1SC06921G

Hu, W.-Y., Li, K., Weitz, A., Wen, A., Kim, H., Murray, J. C., Cheng, R., Chen, B., Naowarojna, N., Grinstaff, M. W., Elliott, S. J., Chen, J.-S., & Liu, P. (2022). Light-Driven Oxidative Demethylation Reaction Catalyzed by a Rieske-Type Non-heme Iron Enzyme Stc2. ACS Catalysis, 12(23), 14559–14570. https://doi.org/10.1021/acscatal.2c04232

Jäntti, J., Joenathan, A., Fugazzola, M., Weeren, R. van, Synder, B. D., Grinstaff, M. W., Töyräs, J., Matikka, H., & Mäkelä, J. T. (2022). TANTALUM OXIDE NANOPARTICLES FOR CONTRAST ENHANCED COMPUTED TOMOGRAPHY IMAGING OF CARTILAGE. Osteoarthritis and Cartilage, 30, S277. https://doi.org/10.1016/j.joca.2022.02.374

Kirsch, J. R., Williamson, A. K., Yeritsyan, D., Blessing, W. A., Momenzadeh, K., Leach, T. R., Williamson, P. M., Korunes-Miller, J. T., DeAngelis, J. P., Zurakowski, D., Nazarian, R. M., Rodriguez, E. K., Nazarian, A., & Grinstaff, M. W. (2022). Minimally invasive, sustained-release relaxin-2 microparticles reverse arthrofibrosis. Science Translational Medicine, 14(666), eabo3357. https://doi.org/10.1126/scitranslmed.abo3357

Kroupa, K. R., Wu, M. I., Zhang, J., Jensen, M., Wong, W., Engiles, J. B., Schaer, T. P., Grinstaff, M. W., Snyder, B. D., Bergholt, M. S., & Albro, M. B. (2022). Raman needle arthroscopy for in vivo molecular assessment of cartilage. Journal of Orthopaedic Research, 40(6), 1338–1348. https://doi.org/10.1002/jor.25155

Lu, C., Yang, D., Klement, J. D., Colson, Y. L., Oberlies, N. H., Pearce, C. J., Colby, A. H., Grinstaff, M. W., Ding, H.-F., Shi, H., & Liu, K. (2022). G6PD functions as a metabolic checkpoint to regulate granzyme B expression in tumor-specific cytotoxic T lymphocytes. Journal for Immunotherapy of Cancer, 10(1), e003543. https://doi.org/10.1136/jitc-2021-003543

Lu, C., Yang, D., Klement, J. D., Colson, Y. L., Oberlies, N. H., Pearce, C. J., Colby, A. H., Grinstaff, M. W., Liu, Z., Shi, H., Ding, H.-F., & Liu, K. (2022). H3K9me3 represses G6PD expression to suppress the pentose phosphate pathway and ROS production to promote human mesothelioma growth. Oncogene, 41(18), Article 18. https://doi.org/10.1038/s41388-022-02283-0

Marks, H. L., Cook, K., Roussakis, E., Cascales, J. P., Korunes-Miller, J. T., Grinstaff, M. W., & Evans, C. L. (2022). Quantitative Luminescence Photography of a Swellable Hydrogel Dressing with a Traffic-Light Response to Oxygen (Adv. Healthcare Mater. 10/2022). Advanced Healthcare Materials, 11(10), 2270048. https://doi.org/10.1002/adhm.202270048

Martinez-Lozano, E., Beeram, I., Yeritsyan, D., Grinstaff, M. W., Snyder, B. D., Nazarian, A., & Rodriguez, E. K. (2022). Management of arthrofibrosis in neuromuscular disorders: A review. BMC Musculoskeletal Disorders, 23(1), 725. https://doi.org/10.1186/s12891-022-05677-z

Muruganandan, S., Pierce, R., Teguh, D. A., Perez, R. F., Bell, N., Nguyen, B., Hohl, K., Snyder, B. D., Grinstaff, M. W., Alberico, H., Woods, D., Kong, Y., Sima, C., Bhagat, S., Ho, K., Rosen, V., Gamer, L., & Ionescu, A. M. (2022). A FoxA2+ long-term stem cell population is necessary for growth plate cartilage regeneration after injury. Nature Communications, 13(1), Article 1. https://doi.org/10.1038/s41467-022-30247-1

Sabatelle, R. C., Liu, R., Hung, Y. P., Bressler, E., Neal, E. J., Martin, A., Ekladious, I., Grinstaff, M. W., & Colson, Y. L. (2022). Ultra-high drug loading improves nanoparticle efficacy against peritoneal mesothelioma. Biomaterials, 285, 121534. https://doi.org/10.1016/j.biomaterials.2022.121534

Sankar, K., Baer, R., Grazon, C., Sabatelle, R. C., Lecommandoux, S., Klapperich, C. M., Galagan, J. E., & Grinstaff, M. W. (2022). An Allosteric Transcription Factor DNA-Binding Electrochemical Biosensor for Progesterone. ACS Sensors, 7(4), 1132–1137. https://doi.org/10.1021/acssensors.2c00133

Saukko, A. E. A., Nykänen, O., Sarin, J. K., Nissi, M. J., te Moller, N. C. R., Weinans, H., Mancini, I. A. D., Visser, J., Brommer, H., van Weeren, P. R., Malda, J., Grinstaff, M. W., & Töyräs, J. (2022). Dual-contrast computed tomography enables detection of equine posttraumatic osteoarthritis in vitro. Journal of Orthopaedic Research, 40(3), 703–711. https://doi.org/10.1002/jor.25066

Scott, K. M., Cohen, D. J., Nielson, D. W., Kim, G., Olson, L. C., McClure, M. J., Grinstaff, M. W., Boyan, B. D., & Schwartz, Z. (2022). Prophylactic administration of miR-451 inhibitor decreases osteoarthritis severity in rats. Scientific Reports, 12(1), Article 1. https://doi.org/10.1038/s41598-022-20415-0

Sockett, K. A., Loffredo, M., Korunes-Miller, J., Varghese, M., & Grinstaff, M. W. (2022). Synthesis and characterization of carbohydrate-based biosurfactant mimetics. Carbohydrate Research, 522, 108697. https://doi.org/10.1016/j.carres.2022.108697

Tsai, L. L., Fitzgerald, D. M., Liu, R., Korunes-Miller, J. T., Neal, E., Hung, Y. P., Bilton, S., Hata, A., Grinstaff, M. W., & Colson, Y. L. (2022). Porous Paclitaxel Mesh Reduces Local Recurrence in Patient-Derived Xenograft Resection Model. The Annals of Thoracic Surgery. https://doi.org/10.1016/j.athoracsur.2022.09.048

Varghese, M., Haque, F., Lu, W., & Grinstaff, M. W. (2022). Synthesis and Characterization of Regioselectively Functionalized Mono-Sulfated and -Phosphorylated Anionic Poly-Amido-Saccharides. Biomacromolecules, 23(5), 2075–2088. https://doi.org/10.1021/acs.biomac.2c00086

Varghese, M., Sockett, K. A., El-Arid, S., Korunes-Miller, J., Guigner, J.-M., & Grinstaff, M. W. (2022). Synthesis of Amphiphilic Diblock Poly-amido-saccharides and Self-Assembly of Polymeric Nanostructures. Macromolecules, 55(13), 5675–5684. https://doi.org/10.1021/acs.macromol.2c00146

Varghese, M., & W. Grinstaff, M. (2022). Beyond nylon 6: Polyamides via ring opening polymerization of designer lactam monomers for biomedical applications. Chemical Society Reviews, 51(19), 8258–8275. https://doi.org/10.1039/D1CS00930C

Xiao, R., Zeng, J., Bressler, E. M., Lu, W., & Grinstaff, M. W. (2022). Synthesis of bioactive (1→6)-β-glucose branched poly-amido-saccharides that stimulate and induce M1 polarization in macrophages. Nature Communications, 13(1), Article 1. https://doi.org/10.1038/s41467-022-32346-5

Zamani, M., Dupaty, J., Baer, R. C., Kuzmanovic, U., Fan, A., Grinstaff, M. W., Galagan, J. E., & Klapperich, C. M. (2022). Paper-Based Progesterone Sensor Using an Allosteric Transcription Factor. ACS Omega, 7(7), 5804–5808. https://doi.org/10.1021/acsomega.1c05737

Dawes, B., Jackson, D., Flynn, R., & Kamenetska, M. (2022). Single molecule force spectroscopy of telomeric H3.3 variant nucleosomes. 2022, Y06.001. https://ui.adsabs.harvard.edu/abs/2022APS..MARY06001D

Kamenetska, M. (2021). Self-Assembled Organometallic Molecular Wires in Single Molecule Circuits. 2021 IEEE 16th Nanotechnology Materials and Devices Conference (NMDC), 1–1. https://doi.org/10.1109/NMDC50713.2021.9677552

Lawson, B., Zahl, P., Hybertsen, M. S., & Kamenetska, M. (2022). Formation and Evolution of Metallocene Single-Molecule Circuits with Direct Gold-π Links. Journal of the American Chemical Society, 144(14), 6504–6515. https://doi.org/10.1021/jacs.2c01322

Pan, X., Qian, C., Chow, A., Wang, L., & Kamenetska, M. (2022). Atomically precise binding conformations of adenine and its variants on gold using single molecule conductance signatures. The Journal of Chemical Physics, 157(23), 234201. https://doi.org/10.1063/5.0103642

Skipper, H. E., May, C. V., Rheingold, A. L., Doerrer, L. H., & Kamenetska, M. (2021). Hard–Soft Chemistry Design Principles for Predictive Assembly of Single Molecule-Metal Junctions. Journal of the American Chemical Society, 143(40), 16439–16447. https://doi.org/10.1021/jacs.1c05142

Bacon, K. L., Felson, D. T., Jafarzadeh, S. R., Kolachalama, V. B., Hausdorff, J. M., Gazit, E., Segal, N. A., Lewis, C. E., Nevitt, M. C., & Kumar, D. (2022). Relation of gait measures with mild unilateral knee pain during walking using machine learning. Scientific Reports, 12(1), Article 1. https://doi.org/10.1038/s41598-022-21142-2

Endrighi, R., Zhao, Y., Hughes, R. B., Kumar, D., & Borrelli, B. (2022). Associations Between Smoking Status and Physical and Mental Health-Related Quality of Life Among Individuals With Mobility Impairments. Annals of Behavioral Medicine, 56(9), 890–899. https://doi.org/10.1093/abm/kaab077

Rose, M. J., LaValley, M. P., Jafarzadeh, S. R., Costello, K. E., Shah, N., Lee, S., Borrelli, B., Messier, S. P., Neogi, T., & Kumar, D. (2022). Impact of COVID-19 Pandemic on Physical Activity, Pain, Mood, and Sleep in Adults With Knee Osteoarthritis. Journal for the Measurement of Physical Behaviour, 5(4), 294–298. https://doi.org/10.1123/jmpb.2022-0019

Shah, N., Kramer, J., Borrelli, B., & Kumar, D. (2022). Interrelations between factors related to physical activity in inactive adults with knee pain. Disability and Rehabilitation, 44(15), 3890–3896. https://doi.org/10.1080/09638288.2021.1891303

Comerci, C. J., Gillman, A. L., Galera-Laporta, L., Gutierrez, E., Groisman, A., Larkin, J. W., Garcia-Ojalvo, J., & Süel, G. M. (2022). Localized electrical stimulation triggers cell-type-specific proliferation in biofilms. Cell Systems, 13(6), 488-498.e4. https://doi.org/10.1016/j.cels.2022.04.001

Hu, K., Incandela, J., Lian, X., Larkin, J. W., & Rosenstein, J. K. (2022). A 13.1mm2 512 × 256 Multimodal CMOS Array for Spatiochemical Imaging of Bacterial Biofilms. 2022 IEEE Custom Integrated Circuits Conference (CICC), 1–2. https://doi.org/10.1109/CICC53496.2022.9772787

Hu, K., Incandela, J. T., Larkin, J. W., & Rosenstein, J. K. (2022). Microscale electrochemical imaging of bacterial biofilms with CMOS sensor arrays. Biophysical Journal, 121(3), 425a. https://doi.org/10.1016/j.bpj.2021.11.641

Incandela, J. T., Hu, K., Rosenstein, J., Rubenstein, B., & Larkin, J. (2022). Coordination between multiple bacterial communities using potassium ion signaling. Biophysical Journal, 121(3), 405a. https://doi.org/10.1016/j.bpj.2021.11.736

Joshi, P. S., Hu, K., Larkin, J. W., & Rosenstein, J. K. (2022). Programmable Electrochemical Stimulation on a Large-Scale CMOS Microelectrode Array. 2022 IEEE Biomedical Circuits and Systems Conference (BioCAS), 439–443. https://doi.org/10.1109/BioCAS54905.2022.9948674

Larkin, J., Süel, G., Gillman, A., McCool, J., Brooks, C., & Mugler, A. (2022). A Computational Model of Interface Formation in Bacterial Colonies. 2022, B05.003. https://ui.adsabs.harvard.edu/abs/2022APS..MARB05003L

Chen, C.-H., Ho, H.-H., Jiang, W.-C., Ao-Ieong, W.-S., Wang, J., Orekhov, A. N., Sobenin, I. A., Layne, M. D., & Yet, S.-F. (2022). Cysteine-rich protein 2 deficiency attenuates angiotensin II-induced abdominal aortic aneurysm formation in mice. Journal of Biomedical Science, 29(1), 25. https://doi.org/10.1186/s12929-022-00808-z

Dance, Y. W., Meshulam, T., Seibel, A. J., Obenreder, M. C., Layne, M. D., Nelson, C. M., & Tien, J. (2022). Adipose Stroma Accelerates the Invasion and Escape of Human Breast Cancer Cells from an Engineered Microtumor. Cellular and Molecular Bioengineering, 15(1), 15–29. https://doi.org/10.1007/s12195-021-00697-6

Downs, M., Sethi, M. K., Raghunathan, R., Layne, M. D., & Zaia, J. (2022). Matrisome changes in Parkinson’s disease. Analytical and Bioanalytical Chemistry, 414(9), 3005–3015. https://doi.org/10.1007/s00216-022-03929-4

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Pham, T. X., Lee, J., Trojanowska, M., Varelas, X., & Ligresti, G. (2022). Single-Cell Transcriptomics Reveals Reduced Number of Lung Progenitors and Aberrant Vascular Homeostasis as Distinctive Features Associated with Lung Disrepair and Persistent Fibrosis with Aging. C29. SENESCENCE, SENOLYTICS, AND AGING IN LUNG BIOLOGY, A3891–A3891. https://doi.org/10.1164/ajrccm-conference.2022.205.1_MeetingAbstracts.A3891

Rabhi, N., Desevin, K., Belkina, A. C., Tilston-Lunel, A., Varelas, X., Layne, M. D., & Farmer, S. R. (2022). Obesity-induced senescent macrophages activate a fibrotic transcriptional program in adipocyte progenitors. Life Science Alliance, 5(5). https://doi.org/10.26508/lsa.202101286

Rohban, M. H., Fuller, A. M., Tan, C., Goldstein, J. T., Syangtan, D., Gutnick, A., DeVine, A., Nijsure, M. P., Rigby, M., Sacher, J. R., Corsello, S. M., Peppler, G. B., Bogaczynska, M., Boghossian, A., Ciotti, G. E., Hands, A. T., Mekareeya, A., Doan, M., Gale, J. P., … Carpenter, A. E. (2022). Virtual screening for small-molecule pathway regulators by image-profile matching. Cell Systems, 13(9), 724-736.e9. https://doi.org/10.1016/j.cels.2022.08.003

Shirai, T., Sekai, M., Kozawa, K., Sato, N., Tanimura, N., Kon, S., Link to external site, this link will open in a new window, Matsumoto, T., Murakami, T., Ito, S., Tilston‐Lunel, A., Varelas, X., Fujita, Y., & Link to external site, this link will open in a new window. (2022). Basal extrusion of single‐oncogenic mutant cells induces dome‐like structures with altered microenvironments. Cancer Science, 113(11), 3710–3721. https://doi.org/10.1111/cas.15483

Vittoria, M. A., Kingston, N., Kotynkova, K., Xia, E., Hong, R., Huang, L., McDonald, S., Tilston-Lunel, A., Darp, R., Campbell, J. D., Lang, D., Xu, X., Ceol, C. J., Varelas, X., & Ganem, N. J. (2022). Inactivation of the Hippo tumor suppressor pathway promotes melanoma. Nature Communications, 13(1), Article 1. https://doi.org/10.1038/s41467-022-31399-w

Chen, G., Shi, L., Lan, L., Wang, R., Li, Y., Du, Z., Hyman, M., Cheng, J.-X., & Yang, C. (2022). High-precision neural stimulation by a highly efficient candle soot fiber optoacoustic emitter. Frontiers in Neuroscience, 16. https://www.frontiersin.org/articles/10.3389/fnins.2022.1005810

Li, Y., Jiang, Y., Lan, L., Ge, X., Cheng, R., Zhan, Y., Chen, G., Shi, L., Wang, R., Zheng, N., Yang, C., & Cheng, J.-X. (2022a). Optically-generated focused ultrasound for noninvasive brain stimulation with ultrahigh precision. Light: Science & Applications, 11(1), 321. https://doi.org/10.1038/s41377-022-01004-2

Li, Y., Jiang, Y., Lan, L., Ge, X., Cheng, R., Zhan, Y., Chen, G., Shi, L., Wang, R., Zheng, N., Yang, C., & Cheng, J.-X. (2022b). Optically-generated focused ultrasound for noninvasive brain stimulation with ultrahigh precision. Light: Science & Applications, 11(1), Article 1. https://doi.org/10.1038/s41377-022-01004-2

Li, Y., Jiang, Y., Lan, L., Ge, X., Cheng, R., Zhan, Y., Chen, G., Shi, L., Wang, R., Zheng, N., Yang, C., & Cheng, J.-X. (2022c). Optically-generated focused ultrasound for noninvasive brain stimulation with ultrahigh precision. Light: Science & Applications, 11(1), Article 1. https://doi.org/10.1038/s41377-022-01004-2

Marar, C., Jiang, Y., Li, Y., Lan, L., Zheng, N., Yang, C., & Cheng, J.-X. (2022). Wireless Neuromodulation at Submillimeter Precision via a Microwave Split-Ring Resonator (p. 2022.07.22.501150). bioRxiv. https://doi.org/10.1101/2022.07.22.501150

Shi, L., Jiang, Y., Zheng, N., Cheng, J.-X., & Yang, C. (2022). High-precision neural stimulation through optoacoustic emitters. Neurophotonics, 9(3), 032207. https://doi.org/10.1117/1.NPh.9.3.032207

Zheng, N., Jiang, Y., Jiang, S., Li, Y., Jia, X., Yang, C., & Cheng, J.-X. (2022). Deep Brain Optoacoustic Stimulation Enabled by a Multifunctional Fiber-based Optoacoustic Emitter. Biophotonics Congress: Biomedical Optics 2022 (Translational, Microscopy, OCT, OTS, BRAIN) (2022), Paper BW4C.4, BW4C.4. https://doi.org/10.1364/BRAIN.2022.BW4C.4

Zong, C., Cheng, R., Chen, F., Lin, P., Zhang, M., Chen, Z., Li, C., Yang, C., & Cheng, J.-X. (2022). Wide-Field Surface-Enhanced Coherent Anti-Stokes Raman Scattering Microscopy. ACS Photonics, 9(3), 1042–1049. https://doi.org/10.1021/acsphotonics.1c02015

Zong, C., Yang, C., & Cheng, J.-X. (2022). Chapter 23—Plasmon-enhanced stimulated Raman scattering microscopy. In J.-X. Cheng, W. Min, Y. Ozeki, & D. Polli (Eds.), Stimulated Raman Scattering Microscopy (pp. 343–356). Elsevier. https://doi.org/10.1016/B978-0-323-85158-9.00009-9

Acevedo, A. J., Desai, D., Zaman, M. H., & Apiou-Sbirlea, G. (2022). PharmaChk: A decade of research and development towards the first quantitative, field-based medicine quality screening instrument. Analyst, 147(17), 3805–3816. https://doi.org/10.1039/D2AN00284A

Andasari, V., & Zaman, M. (2022). Multiscale Modeling of MT1-MMP-Mediated Cell Migration: Destabilization of Cell-Matrix Adhesion (p. 2022.10.12.511909). bioRxiv. https://doi.org/10.1101/2022.10.12.511909

Ettman, C. K., Zaman, M. H., & Galea, S. (2022). Chapter 2. Understanding Migration and Health: Social-Ecological and Lifecourse Perspectives. In Chapter 2. Understanding Migration and Health: Social-Ecological and Lifecourse Perspectives (pp. 10–19). University of Chicago Press. https://doi.org/10.7208/chicago/9780226822495-002

Higgins, G., Higgins, F., Peres, J., Lang, D. M., Abdalrahman, T., Zaman, M. H., Prince, S., & Franz, T. (2022). Intracellular mechanics and TBX3 expression jointly dictate the spreading mode of melanoma cells in 3D environments (p. 2022.06.09.495509). bioRxiv. https://doi.org/10.1101/2022.06.09.495509

Higgins, G., Kim, J. E., Ferruzzi, J., Abdalrahman, T., Franz, T., & Zaman, M. H. (2022). An exploratory study on the role of the stiffness of breast cancer cells in their detachment from spheroids and migration in 3D collagen matrices (p. 2021.01.21.427639). bioRxiv. https://doi.org/10.1101/2021.01.21.427639

Kahn, A., Sabzposh, H., Ozdemir, D., & Zaman, M. (2022). A Case Report of Sagittal Sinus Thrombosis and Pulmonary Embolism in an Asymptomatic SARS-CoV-2 Infection. Open Journal of Medical Sciences, 5–8. https://www.scipublications.com/journal/index.php/ojms/article/view/280

Kiwanuka, M., Higgins, G., Ngcobo, S., Nagawa, J., Lang, D. M., Zaman, M. H., Davies, N. H., & Franz, T. (2022a). Effect of paclitaxel treatment on cellular mechanics and morphology of human oesophageal squamous cell carcinoma in 2D and 3D environments. Integrative Biology, 14(6), 137–149. https://doi.org/10.1093/intbio/zyac013

Kiwanuka, M., Higgins, G., Ngcobo, S., Nagawa, J., Lang, D. M., Zaman, M. H., Davies, N. H., & Franz, T. (2022b). Effect of paclitaxel treatment on cellular mechanics and morphology of human oesophageal squamous cell carcinoma in 2D and 3D environments (p. 2022.03.06.483167). bioRxiv. https://doi.org/10.1101/2022.03.06.483167

Orubu, E. S. F., Albeik, S., Ching, C., Hussein, R., Mousa, A., Horino, M., Naqa, R., Elayyan, M., Saadeh, R., & Zaman, M. H. (2022a). A survey assessing antimicrobial prescribing at UNRWA primary health care centers in Jordan (p. 2022.01.14.22269315). medRxiv. https://doi.org/10.1101/2022.01.14.22269315

Orubu, E. S. F., Albeik, S., Ching, C., Hussein, R., Mousa, A., Horino, M., Naqa, R., Elayyan, M., Saadeh, R., & Zaman, M. H. (2022b). A Survey Assessing Antimicrobial Prescribing at United Nations Relief and Works Agency Primary Health Care Centers in Jordan. The American Journal of Tropical Medicine and Hygiene, 107(2), 474–483. https://doi.org/10.4269/ajtmh.22-0042

Orubu, E. S. F., Ching, C., Fuzail, A. M., & Zaman, M. H. (2022). Chapter 19. Technology and Migrants’ Health: Access, Opportunity, and Ethical Challenges. In Chapter 19. Technology and Migrants’ Health: Access, Opportunity, and Ethical Challenges (pp. 179–185). University of Chicago Press. https://doi.org/10.7208/chicago/9780226822495-019

Orubu, E. S. F., Samad, M. A., Rahman, Md. T., Zaman, M. H., & Wirtz, V. J. (2022). The integrity of the antimicrobial supply chain in Bangladesh: Assessing the regulatory environment and contextual challenges. Journal of Public Health Policy, 43(4), 640–658. https://doi.org/10.1057/s41271-022-00376-4

Umair, M., Orubu, S., Zaman, M. H., Wirtz, V. J., & Mohsin, M. (2022). Veterinary consumption of highest priority critically important antimicrobials and various growth promoters based on import data in Pakistan. PLOS ONE, 17(9), e0273821. https://doi.org/10.1371/journal.pone.0273821

Zaman, M. H., Hussam, R., & Kosematoglu, H. (2022). Chapter 39. The South Asian Context. In Chapter 39. The South Asian Context (pp. 354–362). University of Chicago Press. https://doi.org/10.7208/chicago/9780226822495-039

Yu, X., & Zhang, Y. (2022). A discrete fiber network finite element model of arterial elastin network considering inter-fiber crosslinking property and density. Journal of the Mechanical Behavior of Biomedical Materials, 134, 105396. https://doi.org/10.1016/j.jmbbm.2022.105396

Zhang, Y. (2022). Structural and Mechanical Inhomogeneity in Arterial ECM: Implications for Physiology and Disease. In G. Sommer, K. Li, D. Ch. Haspinger, & R. W. Ogden (Eds.), Solid (Bio)mechanics: Challenges of the Next Decade: A Book Dedicated to Professor Gerhard A. Holzapfel (pp. 73–94). Springer International Publishing. https://doi.org/10.1007/978-3-030-92339-6_3

2021

Kroupa K, Wu MI, Zhang J, Jensen M, Wong W, Engiles J, Schaer T, Grinstaff M, Snyder B, Bergholt M, and Albro M. Raman needle arthroscopy for in vivo molecular assessment of cartilage. Journal of Orthopaedic Research, 2021, 40(6):1338-1348. Read

Joshi, V.G., Chindera, K., Bais, M.V. et al. Novel peptide (RATH) mediated delivery of peptide nucleic acids for antiviral interventions. Appl Microbiol Biotechnol 105, 6669–6677 (2021). Read

Agarwal, R., Paulo, J. A., Toepfer, C. N., Ewoldt, J. K., Sundaram, S., Chopra, A., Zhang, Q., Gorham, J., DePalma, S. R., & Chen, C. S. (2021). Filamin C cardiomyopathy variants cause protein and lysosome accumulation. Circulation Research, 129(7), 751–766. Read

Chen, D.-Y., Khan, N., Close, B. J., Goel, R. K., Blum, B., Tavares, A. H., Kenney, D., Conway, H. L., Ewoldt, J. K., & Chitalia, V. C. (2021). SARS-CoV-2 disrupts proximal elements in the JAK-STAT pathway. Journal of Virology, 95(19), e00862-21. Read

Das, S. L., Bose, P., Lejeune, E., Reich, D. H., Chen, C., & Eyckmans, J. (2021). Extracellular matrix alignment directs provisional matrix assembly and three dimensional fibrous tissue closure. Tissue Engineering Part A, 27(23–24), 1447–1457. Read

Javor, J., Ewoldt, J. K., Cloonan, P. E., Chopra, A., Luu, R. J., Freychet, G., Zhernenkov, M., Ludwig, K., Seidman, J. G., & Seidman, C. E. (2021). Probing the subcellular nanostructure of engineered human cardiomyocytes in 3D tissue. Microsystems & Nanoengineering, 7(1), 10. Read

Jayne, R. K., Karakan, M. Ç., Zhang, K., Pierce, N., Michas, C., Bishop, D. J., Chen, C. S., Ekinci, K. L., & White, A. E. (2021). Direct laser writing for cardiac tissue engineering: A microfluidic heart on a chip with integrated transducers. Lab on a Chip, 21(9), 1724–1737. Read

Kim, S., Uroz, M., Bays, J. L., & Chen, C. S. (2021). Harnessing mechanobiology for tissue engineering. Developmental Cell, 56(2), 180–191. Read

Kostecki, G. M., Shi, Y., Chen, C. S., Reich, D. H., Entcheva, E., & Tung, L. (2021). Optogenetic current in myofibroblasts acutely alters electrophysiology and conduction of co-cultured cardiomyocytes. Scientific Reports, 11(1), 1–12. Read

Singh, D. K., Singh, B., Ganatra, S. R., Gazi, M., Cole, J., Thippeshappa, R., Alfson, K. J., Clemmons, E., Gonzalez, O., & Escobedo, R. (2021). Responses to acute infection with SARS-CoV-2 in the lungs of rhesus macaques, baboons and marmosets. Nature Microbiology, 6(1), 73–86. Read

Song, J., Michas, C., Chen, C. S., White, A. E., & Grinstaff, M. W. (2021). Controlled cell alignment using two-photon direct laser writing-patterned hydrogels in 2D and 3D. Macromolecular Bioscience, 21(5), 2100051. Read

Tefft, J. B., Chen, C. S., & Eyckmans, J. (2021). Reconstituting the dynamics of endothelial cells and fibroblasts in wound closure. APL Bioengineering, 5(1), 016102. Read

Ward, T., Tai, W., Morton, S., Impens, F., Van Damme, P., Van Haver, D., Timmerman, E., Venturini, G., Zhang, K., & Jang, M. Y. (2021). Mechanisms of congenital heart disease caused by NAA15 haploinsufficiency. Circulation Research, 128(8), 1156–1169. Read

Zhang, K., Cloonan, P. E., Sundaram, S., Liu, F., Das, S. L., Ewoldt, J. K., Bays, J. L., Tomp, S., Toepfer, C. N., & Marsiglia, J. D. (2021). Plakophilin-2 truncating variants impair cardiac contractility by disrupting sarcomere stability and organization. Science Advances, 7(42), eabh3995. Read

Zhou, D. W., Fernández-Yagüe, M. A., Holland, E. N., García, A. F., Castro, N. S., O’Neill, E. B., Eyckmans, J., Chen, C. S., Fu, J., & Schlaepfer, D. D. (2021). Force-FAK signaling coupling at individual focal adhesions coordinates mechanosensing and microtissue repair. Nature Communications, 12(1), 2359. Read

Izu, Y., Adams, S. M., Connizzo, B. K., Beason, D. P., Soslowsky, L. J., Koch, M., & Birk, D. E. (2021). Collagen XII mediated cellular and extracellular mechanisms regulate establishment of tendon structure and function. Matrix Biology, 95, 52–67. Read

Siadat, S. M., Zamboulis, D. E., Thorpe, C. T., Ruberti, J. W., & Connizzo, B. K. (2021). Tendon Extracellular Matrix Assembly, Maintenance and Dysregulation Throughout Life. In J. Halper (Ed.), Progress in Heritable Soft Connective Tissue Diseases (pp. 45–103). Springer International Publishing. Read

Chen, H., Deng, J., Cui, Q., Chanda, B., & Henzler-Wildman, K. (2021). Mapping temperature-dependent conformational change in the voltage-sensing domain of an engineered heat-activated K+ channel. Proceedings of the National Academy of Sciences, 118(14), e2017280118. Read

Cheng, R., Lai, R., Peng, C., Lopez, J., Li, Z., Naowarojna, N., Li, K., Wong, C., Lee, N., & Whelan, S. A. (2021). Implications for an Imidazole-2-yl Carbene Intermediate in the Rhodanase-Catalyzed C–S Bond Formation Reaction of Anaerobic Ergothioneine Biosynthesis. ACS Catalysis, 11(6), 3319–3334. Read

Craven, S. J., Condon, S. G., Diaz-Vazquez, G., Cui, Q., & Senes, A. (2021). Nonideal polar residues in the core of the coiled coil of FtsLB are critical for modulating its stability and activation. BioRxiv, 2021–04. Read

Cui, A. Y., & Cui, Q. (2021). Modulation of nanoparticle diffusion by surface ligand length and charge: Analysis with molecular dynamics simulations. The Journal of Physical Chemistry B, 125(17), 4555–4565. Read

Cui, Q., Pal, T., & Xie, L. (2021). Biomolecular QM/MM simulations: What are some of the “burning issues”? The Journal of Physical Chemistry B, 125(3), 689–702. Read

Deng, J., & Cui, Q. (2021). Reverse Protonation of Buried Ion-Pairs in Staphylococcal Nuclease Mutants. Journal of Chemical Theory and Computation, 17(7), 4550–4563. Read

Fang, J., Leichter, S. M., Jiang, J., Biswal, M., Lu, J., Zhang, Z.-M., Ren, W., Zhai, J., Cui, Q., & Zhong, X. (2021). Substrate deformation regulates DRM2-mediated DNA methylation in plants. Science Advances, 7(23), eabd9224. Read

Gregory, M. T., Gao, Y., Cui, Q., & Yang, W. (2021). Multiple deprotonation paths of the nucleophile 3′-OH in the DNA synthesis reaction. Proceedings of the National Academy of Sciences, 118(23), e2103990118. Read

Maag, D., Mast, T., Elstner, M., Cui, Q., & Kubař, T. (2021). O to bR transition in bacteriorhodopsin occurs through a proton hole mechanism. Proceedings of the National Academy of Sciences, 118(39), e2024803118. Read

Mandal, T., Spagnolie, S. E., Audhya, A., & Cui, Q. (2021). Protein-induced membrane curvature in coarse-grained simulations. Biophysical Journal, 120(15), 3211–3221. Read

Ren, W., Fan, H., Grimm, S. A., Kim, J. J., Li, L., Guo, Y., Petell, C. J., Tan, X.-F., Zhang, Z.-M., & Coan, J. P. (2021). DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation. Nature Communications, 12(1), 2490. Read

Voegtle, M. J., Pal, T., Pennathur, A. K., Menachekanian, S., Patrow, J. G., Sarkar, S., Cui, Q., & Dawlaty, J. M. (2021). Interfacial polarization and ionic structure at the ionic liquid–metal interface studied by vibrational spectroscopy and molecular dynamics simulations. The Journal of Physical Chemistry B, 125(10), 2741–2753. Read

Zeng, J., Weng, J., Zhang, Y., Xia, F., Cui, Q., & Xu, X. (2021). Conformational Features of Ras: Key Hydrogen-Bonding Interactions of Gln61 in the Intermediate State during GTP Hydrolysis. The Journal of Physical Chemistry B, 125(31), 8805–8813. Read

Zhang, Y., Dahal, U., Feng, Z. V., Rosenzweig, Z., Cui, Q., & Hamers, R. J. (2021). Influence of surface ligand molecular structure on phospholipid membrane disruption by cationic nanoparticles. Langmuir, 37(24), 7600–7610. Read

Zhi, B., Yao, X., Wu, M., Mensch, A., Cui, Y., Deng, J., Duchimaza-Heredia, J. J., Trerayapiwat, K. J., Niehaus, T., & Nishimoto, Y. (2021). Multicolor polymeric carbon dots: Synthesis, separation and polyamide-supported molecular fluorescence. Chemical Science, 12(7), 2441–2455. Read

Castellanos, L. E., Balliro, C. A., Sherwood, J. S., Jafri, R., Hillard, M. A., Greaux, E., Selagamsetty, R., Zheng, H., El-Khatib, F. H., & Damiano, E. R. (2021). Performance of the insulin-only iLet bionic pancreas and the bihormonal iLet using dasiglucagon in adults with type 1 diabetes in a home-use setting. Diabetes Care, 44(6), e118–e120. Read

Rayannavar, A., Mitteer, L. M., Balliro, C. A., El-Khatib, F. H., Lord, K. L., Hawkes, C. P., Ballester, L. S., Damiano, E. R., Russell, S. J., & De León, D. D. (2021). The bihormonal bionic pancreas improves glycemic control in individuals with hyperinsulinism and postpancreatectomy diabetes: A pilot study. Diabetes Care, 44(11), 2582–2585. Read

Rayannavar, A., Mitteer, L. M., Balliro, C. A., El-Khatib, F. H., Lord, K. L., Hawkes, C. P., Ballester, L. S., Damiano, E. R., Russell, S. J., & De Leon, D. D. (2021). To determine whether the bihormonal bionic pancreas (BHBP) improves glycemic control and reduces hypoglycemia in individuals with congenital hyperinsulinism (HI) and postpancreatectomy diabetes (PPD) compared with usual care (UC). Diabetes Care, 44. Read

Russell, S. J., Balliro, C., Ekelund, M., El-Khatib, F., Graungaard, T., Greaux, E., Hillard, M., Jafri, R. Z., Rathor, N., & Selagamsetty, R. (2021). Improvements in glycemic control achieved by altering the t max setting in the iLet® bionic pancreas when using fast-acting insulin aspart: A randomized trial. Diabetes Therapy, 12(7), 2019–2033. Read

Divieti Pajevic, P. (2021). Bone and blood: IL-19 to the rescue. Blood, The Journal of the American Society of Hematology, 137(25), 3467–3468. Read

Uda, Y., Saini, V., Petty, C. A., Alshehri, M., Shi, C., Spatz, J. M., Santos, R., Newell, C. M., Huang, T. Y., Kochen, A., Kim, J. W., Constantinou, C. K., Saito, H., Held, K. D., Hesse, E., & Pajevic, P. D. (2021). Parathyroid hormone signaling in mature osteoblasts/osteocytes protects mice from age-related bone loss. Aging (Albany NY), 13(24), 25607-25642. Read

Uda, Y., Santos, R., Kochen, A., Newell, C., Huang, T. Y., & Pajevic, P. D. (2021). PTH Protects Osteocytes From Oxidative Stress and Cellular Senescence. Journal of the Endocrine Society, 5(Suppl 1), A239. read

Staab, J. S., Kolb, A. L., Tomlinson, R. E., Pajevic, P. D., Matheny Jr, R. W., & Hughes, J. M. (2021). Emerging evidence that adaptive bone formation inhibition by non-steroidal anti-inflammatory drugs increases stress fracture risk. Experimental Biology and Medicine, 246(9), 1104–1111. Read

Uda, Y., Saini, V., Petty, C. A., Alshehri, M., Shi, C., Spatz, J. M., Santos, R., Newell, C. M., Huang, T. Y., & Kochen, A. (2021). Parathyroid hormone signaling in mature osteoblasts/osteocytes protects mice from age-related bone loss. Aging (Albany NY), 13(24), 25607. Read

Uda, Y., Spatz, J. M., Hussein, A., Garcia, J. H., Lai, F., Dedic, C., Fulzele, K., Dougherty, S., Eberle, M., & Adamson, C. (2021). Global transcriptomic analysis of a murine osteocytic cell line subjected to spaceflight. The FASEB Journal, 35(5), e21578. Read

Staab, Jeffery S., Alexander L. Kolb, Ryan E. Tomlinson, Paola Divieti Pajevic, Ronald W. Matheny Jr, and Julie M. Hughes. “Emerging Evidence That Adaptive Bone Formation Inhibition by Non-Steroidal Anti-Inflammatory Drugs Increases Stress Fracture Risk.” Experimental Biology and Medicine 246, no. 9 (2021): 1104–11. Read.

Das, S. L., Bose, P., Lejeune, E., Reich, D. H., Chen, C., & Eyckmans, J. (2021). Extracellular matrix alignment directs provisional matrix assembly and three-dimensional fibrous tissue closure. Tissue Engineering Part A, 27(23–24), 1447–1457. Read

Tefft, J. B., Chen, C. S., & Eyckmans, J. (2021). Reconstituting the dynamics of endothelial cells and fibroblasts in wound closure. APL Bioengineering, 5(1), 016102. Read

Zhou, D. W., Fernández-Yagüe, M. A., Holland, E. N., García, A. F., Castro, N. S., O’Neill, E. B., Eyckmans, J., Chen, C. S., Fu, J., Schlaepfer, D. D., & García, A. J. (2021). Force-FAK signaling coupling at individual focal adhesions coordinates mechanosensing and microtissue repair. Nature Communications, 12(1), Article 1. Read

Roseen, E. J., Gerlovin, H., Felson, D. T., Delitto, A., Sherman, K. J., & Saper, R. B. (2021). Which chronic low back pain patients respond favorably to yoga, physical therapy, and a self-care book? Responder analyses from a randomized controlled trial. Pain Medicine, 22(1), 165–180. Read

Zhai, G., Sun, X., Randell, E. W., Liu, M., Wang, N., Tolstykh, I., Rahman, P., Torner, J., Lewis, C. E., & Nevitt, M. C. (2021). Phenylalanine is a novel marker for radiographic knee osteoarthritis progression: The MOST study. The Journal of Rheumatology, 48(1), 123–128. Read

A. Cook, K., Naguib, N., Kirsch, J., Hohl, K., H. Colby, A., Sheridan, R., K. Rodriguez, E., Nazarian, A., & W. Grinstaff, M. (2021). In situ gelling and dissolvable hydrogels for use as on-demand wound dressings for burns. Biomaterials Science, 9(20), 6842–6850. https://doi.org/10.1039/D1BM00711D

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Freid, R., Hussein, A. I., & Schlezinger, J. J. (2021). Tributyltin protects against ovariectomy-induced trabecular bone loss in C57BL/6J mice with an attenuated effect in high fat fed mice. Toxicology and Applied Pharmacology, 431, 115736. https://doi.org/10.1016/j.taap.2021.115736

Kassotis, C. D., Hoffman, K., Völker, J., Pu, Y., Veiga-Lopez, A., Kim, S. M., Schlezinger, J. J., Bovolin, P., Cottone, E., Saraceni, A., Scandiffio, R., Atlas, E., Leingartner, K., Krager, S., Tischkau, S. A., Ermler, S., Legler, J., Chappell, V. A., Fenton, S. E., … Stapleton, H. M. (2021). Reproducibility of adipogenic responses to metabolism disrupting chemicals in the 3T3-L1 pre-adipocyte model system: An interlaboratory study. Toxicology, 461, 152900. https://doi.org/10.1016/j.tox.2021.152900

Kim, S., Reed, E., Monti, S., & Schlezinger, J. J. (n.d.). A Data-Driven Transcriptional Taxonomy of Adipogenic Chemicals to Identify White and Brite Adipogens. Environmental Health Perspectives, 129(7), 077006. https://doi.org/10.1289/EHP6886

Rodriguez, F., & Seta, F. (2021). Editorial: The Role of Sirtuin-1 in Cardiovascular and Renal Pathophysiology. Frontiers in Physiology, 12. https://www.frontiersin.org/articles/10.3389/fphys.2021.770386

Zhou, Y., Wan, X., Seidel, K., Zhang, M., Goodman, J. B., Seta, F., Hamburg, N., & Han, J. (2021). Aging and Hypercholesterolemia Differentially Affect the Unfolded Protein Response in the Vasculature of ApoE ^−/− Mice. Journal of the American Heart Association, 10(18), e020441. https://doi.org/10.1161/JAHA.120.020441

Banerji, R., Grifno, G. N., Shi, L., Smolen, D., LeBourdais, R., Muhvich, J., Eberman, C., Hiller, B., Lee, J., Regan, K., Zheng, S., Zhang, S. S., Jiang, J., Phil, R., Traber, K., Ligresti, G., Mizgerd, J. P., Suki, B., & Nia, H. T. (n.d.). Probing lung function at high spatiotemporal resolution using a novel crystal ribcage.

Casey, D., Mori, V., Herrmann, J., Suki, B., Janssen-Heininger, Y. M. W., & Bates, J. H. T. (2021). Local Fractal Dimension Variation of Collagen Structure in Idiopathic Pulmonary Fibrosis. TP126. TP126 STRUCTURE AND FUNCTION IN PARENCHYMAL LUNG DISEASES, A4651–A4651. https://doi.org/10.1164/ajrccm-conference.2021.203.1_MeetingAbstracts.A4651

Casey, D. T., Bou Jawde, S., Herrmann, J., Mori, V., Mahoney, J. M., Suki, B., & Bates, J. H. T. (2021). Percolation of collagen stress in a random network model of the alveolar wall. Scientific Reports, 11(1), Article 1. https://doi.org/10.1038/s41598-021-95911-w

Herrmann, J., Mori, V., Bates, J. H. T., & Suki, B. (2021). Mathematical Modeling to Understand Plausible Explanations of Hypoxemia in Early COVID-19. TP117. TP117 COVID-19 PATHOPHYSIOLOGY AND MODELLING, A4471–A4471. https://doi.org/10.1164/ajrccm-conference.2021.203.1_MeetingAbstracts.A4471

Murthy, S., Suki, B., Herrmann, J., Yuan, Z., Peters, K., & Kaczka, D. W. (2021). Personalized Pressure-Volume Curve of the Lung Through CT-Based Network Modeling. TP123. TP123 LUNG FUNCTION: FLOW, VOLUME, AND HETEROGENEITY, A4617–A4617. https://doi.org/10.1164/ajrccm-conference.2021.203.1_MeetingAbstracts.A4617

Sonnenberg, A. H., Taylor, E., Mondoñedo, J. R., Jawde, S. B., Amin, S. D., Song, J., Grinstaff, M. W., & Suki, B. (2021). Breath Hold Facilitates Targeted Deposition of Aerosolized Droplets in a 3D Printed Bifurcating Airway Tree. Annals of Biomedical Engineering, 49(2), 812–821. https://doi.org/10.1007/s10439-020-02623-9

Zeldich, D., Bou Jawde, S., Herrmann, J., Arnaout, L., Griffin, M., Grunfeld, N., Zhang, Y., Krishnan, R., Bartolák-Suki, E., & Suki, B. (2021). Stabilizing breathing pattern using local mechanical vibrations: Comparison of deterministic and stochastic stimulations in rodent models of apnea of prematurity. Biomedical Engineering Letters, 11(4), 383–392. https://doi.org/10.1007/s13534-021-00203-x

Kwak, D., & Thompson, L. V. (2021). Frailty: Past, present, and future? Sports Medicine and Health Science, 3(1), 1–10. https://doi.org/10.1016/j.smhs.2020.11.005

Alysandratos, K.-D., Russo, S. J., Petcherski, A., Taddeo, E. P., Acín-Pérez, R., Villacorta-Martin, C., Jean, J. C., Mulugeta, S., Rodriguez, L. R., Blum, B. C., Hekman, R. M., Hix, O. T., Minakin, K., Vedaie, M., Kook, S., Tilston-Lunel, A. M., Varelas, X., Wambach, J. A., Cole, F. S., … Kotton, D. N. (2021). Patient-specific iPSCs carrying an SFTPC mutation reveal the intrinsic alveolar epithelial dysfunction at the inception of interstitial lung disease. Cell Reports, 36(9), 109636. https://doi.org/10.1016/j.celrep.2021.109636

Baldan, S., Meriin, A. B., Yaglom, J., Alexandrov, I., Varelas, X., Xiao, Z.-X. J., & Sherman, M. Y. (n.d.). Regulation of Hippo pathway by Hsp70-Bag3 complex: Bag3 modulates YAP phosphorylation and its nuclear translocation. Journal of Cell Science. https://cob.silverchair-cdn.com/cob/content_public/journal/jcs/jam/10.1242_jcs.259107/1/jcs259107.pdf?Expires=1680123607&Signature=CzFh0Meu~i~KhSTEqmy9AkPDkWblTwtwKtxASfjpUIu2sUlsar2VinU2fhBZD-gKLuw3WS9NuYm~TgxPiqucI1GOLZyoNK8f~1~gkQd73p65WC3ZPtxerFUppQ6qbKhLdoxqUWuVWTrrhYoewCTEsX-uj9juKQOctFmUyyMu6EVkNYdH-Bi4Odh1npUi4BeBlPMoXILHCDGSjq5Ewa84U8-cLK2vXs~FRe~EYSqvF~GvYIFx6NcQ20M1v-mXREI8Btsyr0lUapiKAynHc259Z~IGFV3x30iWk~r-o9qZQfEIpet16owQ9UPWxfjzELz~TrgAxA9L1QiwJ~niOL4hpw__&Key-Pair-Id=APKAIE5G5CRDK6RD3PGA

Baldan, S., Meriin, A. B., Yaglom, J., Alexandrov, I., Varelas, X., Xiao, Z.-X. J., & Sherman, M. Y. (2021). The Hsp70–Bag3 complex modulates the phosphorylation and nuclear translocation of Hippo pathway protein Yap. Journal of Cell Science, 134(23), jcs259107. https://doi.org/10.1242/jcs.259107

Chan, S., Smith, E., Gao, Y., Kwan, J., Blum, B. C., Tilston-Lunel, A. M., Turcinovic, I., Varelas, X., Cardamone, M. D., Monti, S., Emili, A., & Perissi, V. (2021). Loss of G-Protein Pathway Suppressor 2 Promotes Tumor Growth Through Activation of AKT Signaling. Frontiers in Cell and Developmental Biology, 8. https://www.frontiersin.org/articles/10.3389/fcell.2020.608044

Cheng, N., Stampouloglou, E., Federico, A., Monti, S., Szeto, G. L., & Varelas, X. (2021). Inhibiting Yap for improved T cell activation and anti-tumor immunity. The Journal of Immunology, 206(1_Supplement), 25.12. https://doi.org/10.4049/jimmunol.206.Supp.25.12

Dela Cruz, A., Kartha, V., Tilston-Lunel, A., Mi, R., Reynolds, T. L., Mingueneau, M., Monti, S., Jensen, J. L., Skarstein, K., Varelas, X., & Kukuruzinska, M. A. (2021). Gene expression alterations in salivary gland epithelia of Sjögren’s syndrome patients are associated with clinical and histopathological manifestations. Scientific Reports, 11(1), Article 1. https://doi.org/10.1038/s41598-021-90569-w

Federico, A., Kern, J., Varelas, X., & Monti, S. (2021). Structure Learning for Hierarchical Regulatory Networks (p. 2021.05.27.446022). bioRxiv. https://doi.org/10.1101/2021.05.27.446022

Hekman, R. M., Hume, A. J., Goel, R. K., Abo, K. M., Huang, J., Blum, B. C., Werder, R. B., Suder, E. L., Paul, I., Phanse, S., Youssef, A., Alysandratos, K. D., Padhorny, D., Ojha, S., Mora-Martin, A., Kretov, D., Ash, P. E. A., Verma, M., Zhao, J., … Emili, A. (2021). Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2. Molecular Cell, 81(1), 212. https://doi.org/10.1016/j.molcel.2020.12.028

Hicks-Berthet, J., Ning, B., Federico, A., Tilston-Lunel, A., Matschulat, A., Ai, X., Lenburg, M. E., Beane, J., Monti, S., & Varelas, X. (2021). Yap/Taz inhibit goblet cell fate to maintain lung epithelial homeostasis. Cell Reports, 36(2), 109347. https://doi.org/10.1016/j.celrep.2021.109347

Jones, D. L., Meridew, J. A., Link, P. A., Ducharme, M. T., Lydon, K. L., Choi, K. M., Caporarello, N., Tan, Q., Diaz Espinosa, A. M., Xiong, Y., Lee, J.-H., Ye, Z., Yan, H., Ordog, T., Ligresti, G., Varelas, X., & Tschumperlin, D. J. (2021). ZNF416 is a pivotal transcriptional regulator of fibroblast mechanoactivation. Journal of Cell Biology, 220(5), e202007152. https://doi.org/10.1083/jcb.202007152

Ning, B., Tilston-Lunel, A., Hicks-Berthet, J., Mazzilli, S. A., Beane, J. E., Varelas, X., & Lenburg, M. E. (2021). Abstract 2434: Transcriptional crosstalk between YAP, TEAD and TP63 is associated with early lung carcinogenesis. Cancer Research, 81(13_Supplement), 2434. https://doi.org/10.1158/1538-7445.AM2021-2434

Tilston-Lunel, A., Mazzilli, S., Kingston, N. M., Szymaniak, A. D., Hicks-Berthet, J., Kern, J. G., Abo, K., Reid, M. E., Perdomo, C., Wilson, A. A., Spira, A., Beane, J., & Varelas, X. (2021). Aberrant epithelial polarity cues drive the development of precancerous airway lesions. Proceedings of the National Academy of Sciences, 118(18), e2019282118. https://doi.org/10.1073/pnas.2019282118

Vittoria, M. A., Kingston, N., Xia, E., Hong, R., Huang, L., McDonald, S., Tilston- Lunel, A., Darp, R. A., Campbell, J., Lang, D., Xu, X., Ceol, C. J., Varelas, X., & Ganem, N. J. (2021). Inactivation of the Hippo Tumor Suppressor Pathway Promotes Melanoma [preprint]. BioRxiv. https://doi.org/10.1101/2021.05.04.442615

Dutta, A., Pihuleac, B., Chen, Y., Zong, C., Dal Negro, L., & Yang, C. (2021). Au@SiO2@Au core-shell-shell nanoparticles for enhancing photocatalytic activity of hematite. Materials Today Energy, 19, 100576. https://doi.org/10.1016/j.mtener.2020.100576

Jiang, Y., Huang, Y., Luo, X., Wu, J., Zong, H., Shi, L., Cheng, R., Zhu, Y., Jiang, S., Lan, L., Jia, X., Mei, J., Man, H.-Y., Cheng, J.-X., & Yang, C. (2021). Neural Stimulation In Vitro and In Vivo by Photoacoustic Nanotransducers. Matter, 4(2), 654–674. https://doi.org/10.1016/j.matt.2020.11.019

Shi, L., Jiang, Y., Fernandez, F. R., Chen, G., Lan, L., Man, H.-Y., White, J. A., Cheng, J.-X., & Yang, C. (2021). Non-genetic photoacoustic stimulation of single neurons by a tapered fiber optoacoustic emitter. Light: Science & Applications, 10(1), Article 1. https://doi.org/10.1038/s41377-021-00580-z

Zong, C., Xie, Y., Zhang, M., Huang, Y., Yang, C., & Cheng, J.-X. (2021). Plasmon-enhanced coherent anti-stokes Raman scattering vs plasmon-enhanced stimulated Raman scattering: Comparison of line shape and enhancement factor. The Journal of Chemical Physics, 154(3), 034201. https://doi.org/10.1063/5.0035163

Afzal, F., Zaman, M., Chaudhry, F., Afzal, D., Farahani, M., & Cancan, M. (2021). Computational analysis of new degree-based descriptors of Zig-Zag Benzenoid system [704]. 3, 418–424. https://doi.org/10.22034/ecc.2021.284310.1174

Ali, Y., Uwagbale, E., Visen, S., Kahn, A., Kalambay, J., & Zaman, M. (2021). COVID-19 and Legionella Co-Infection. Global Journal of Medical Case Reports, 24–28. https://www.scipublications.com/journal/index.php/gjmcr/article/view/170

Assessing the Relationship Between Zero-Dose Communities and Access to Selected Primary Healthcare Services for Children and Pregnant Women in Emergency Settings. (n.d.).

Ching, C., & Zaman, M. H. (2021). Impact of ciprofloxacin impurities on bacterial growth, antibiotic resistance development and content assays. Letters in Applied Microbiology, 73(2), 220–228. https://doi.org/10.1111/lam.13494

Dai, T., Zaman, M. H., Padula, W. V., & Davidson, P. M. (2021). Supply chain failures amid Covid‐19 signal a new pillar for global health preparedness. Journal of Clinical Nursing, 30(1–2), e1–e3. https://doi.org/10.1111/jocn.15400

Ferruzzi, J., DeCamp, S. J., Tsuda, V. M. K., Zaman, M. H., Fredberg, J. J., & Roblyer, D. M. (2021). Multiphoton fluorescence lifetime imaging of NADH reveals spatio-temporal patterns in cell metabolism during collective migration. Multiscale Imaging and Spectroscopy II, 11622, 116220G. https://doi.org/10.1117/12.2578743

Fuzail, M. A., Ahmed, B., Burke, D. L., Spjeldnæs, A. H., Horino, M., Ching, C., & Zaman, M. H. (2021). Microbiome research potential for developing holistic approaches to improve refugee health. Journal of Global Health Reports, 5, e2021094. https://doi.org/10.29392/001c.28997

Higgins, G., Kim, J., Ferruzzi, J., Abdalrahman, T., Franz, T., & Zaman, M. (2021). An exploratory study on the role of the stiffness of breast cancer cells in their detachment from spheroids and migration in 3D collagen matrice. https://doi.org/10.1101/2021.01.21.427639

Indorica, S., Ching, C., Darash, D., Suprenant, M., Emma, B., Heins, Z., Khalil, A. S., & Zaman, M. H. (2021). Computational Model To Quantify the Growth of Antibiotic-Resistant Bacteria in Wastewater. MSystems, 6(3). https://doi.org/10.1128/mSystems.00360-21

Nizamuddin, S., Ching, C., Kamal, R., Zaman, M. H., & Sultan, F. (2021). Continued Outbreak of Ceftriaxone-Resistant Salmonella enterica Serotype Typhi across Pakistan and Assessment of Knowledge and Practices among Healthcare Workers. The American Journal of Tropical Medicine and Hygiene, 104(4), 1265–1270. https://doi.org/10.4269/ajtmh.20-0783

Orubu, E. S. F., Najwa, A., Ching, C., Jawdeh, S. B., Anderson, J., Sheikh, R., Hariri, F., Basaleem, H., & Zaman, M. H. (2021). Assessing antimicrobial resistance, utilization and stewardship in Yemen: An exploratory mixed-methods study (p. 2021.01.27.21250628). medRxiv. https://doi.org/10.1101/2021.01.27.21250628

Orubu, E. S. F., Samad, M. A., Rahman, M. T., Zaman, M. H., & Wirtz, V. J. (2021). Mapping the Antimicrobial Supply Chain in Bangladesh: A Scoping-Review-Based Ecological Assessment Approach. Global Health: Science and Practice, 9(3), 532–547. https://doi.org/10.9745/GHSP-D-20-00502

Outterson, K., Orubu, E. S. F., Rex, J., Årdal, C., & Zaman, M. H. (2021). Patient Access in 14 High-Income Countries to New Antibacterials Approved by the US Food and Drug Administration, European Medicines Agency, Japanese Pharmaceuticals and Medical Devices Agency, or Health Canada, 2010–2020. Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America, 74(7), 1183–1190. https://doi.org/10.1093/cid/ciab612

Sutradhar, I., Ching, C., Desai, D., Suprenant, M., Briars, E., Heins, Z., Khalil, A. S., & Zaman, M. H. (2021). Computational Model To Quantify the Growth of Antibiotic-Resistant Bacteria in Wastewater. MSystems, 6(3), e00360-21. https://doi.org/10.1128/mSystems.00360-21

Sutradhar, I., & Zaman, M. H. (2021). Evaluation of the effect of temperature on the stability and antimicrobial activity of rifampicin quinone. Journal of Pharmaceutical and Biomedical Analysis, 197, 113941. https://doi.org/10.1016/j.jpba.2021.113941

Zaman, M. H. (2021). Inclusion and equity through STEM training. Science, 372(6545), 926–926. https://doi.org/10.1126/science.abj1410

Zaman, M. H., & Khanna, T. (2021). The Cost and Evolution of Quality at Cipla Ltd., 1935–2016. Business History Review, 95(2), 249–274. https://doi.org/10.1017/S000768052000077X

Wang, R., Yu, X., Gkousioudi, A., & Zhang, Y. (2021). Effect of Glycation on Interlamellar Bonding of Arterial Elastin. Experimental Mechanics, 61(1), 81–94. https://doi.org/10.1007/s11340-020-00644-y

Wang, R., Yu, X., & Zhang, Y. (2021). Mechanical and Structural Contributions of Elastin and Collagen Fibers to Interlamellar Bonding in the Arterial Wall. Biomechanics and Modeling in Mechanobiology, 20(1), 93–106. https://doi.org/10.1007/s10237-020-01370-z

2020

2019

Mattson JM, Wang Y, Zhang Y. Contributions of Glycosaminoglycans to Collagen Fiber Recruitment in Constitutive Modeling of Arterial Mechanics. Journal of Biomechanics, 2019 Dec;92:1-10. doi: 10.1016/j.jmbbm.2018.12.023. PMID: 30654215. Read

Horenstein R, Lewis CL, Yan S, Halverstadt A, Shefelbine SJ. Validation of MIMUs for measuring hip joint angles. Journal of Biomechanics, 2019 Nov 24;91:170-174. doi: 10.1016/j.jbiomech.2019.05.029. PMID: 31771263. Read

Song J, Michas C, Chen CS, White AE, and Grinstaff MW. From Simple to Architecturally Complex Hydrogel Scaffolds for Cell and Tissue Engineering Applications: Opportunities Presented by Two-photon Polymerization. Advanced Healthcare Materials, 2019 Nov 20; doi:10.1002/adhm.201901217. Read

Li A, Chapuy B, Varelas X, Sebastiani P, Monti S. Identification of candidate cancer drivers by integrative Epi-DNA and Gene Expression (iEDGE) data analysis. Sci Rep, 2019 Nov 15; 9(1):16904. doi: 10.1038/s41598-019-52886-z. PMID: 31729402. Read

Roberts EG, Kleptsyn VF, Roberts GD, Mossburg KJ, Feng B, Domian IJ, Emani SM, Wong JY. Development of a bio-MEMS device for electrical and mechanical conditioning and characterization of cell sheets for myocardial repair. Biotechnol Bioeng. 2019 Nov;116(11):3098-3111. doi: 10.1002/bit.27123. Epub 2019 Aug 6. PMID: 31317531. Read

Bergholt MS, Serio A, Albro MB. Raman imaging: Guiding light for the extracellular matrix. Frontiers in Bioengineering and Biotechnology, 2019 Nov 1;7:303. doi: 10.3389/fbioe.2019.00303. PMID: 31737621. Read

Haak AJ, Kostallari E, Sicard D, Ligresti G, Choi KM, Caporarello N, Jones DL, Tan Q, Meridew J, Diaz Espinosa AM, Aravamudhan A, Maiers JL, Britt RD, Roden AC, Pabelick CM, Prakash YS, Nouraie SM, Li X, Zhang Y, Kass DJ, Lagares D, Tager AM, Varelas X, Shah VH, Tschumperlin DJ. Selective YAP/TAZ inhibition in fibroblasts via dopamine receptor D1 agonism reverses fibrosis. Sci Transl Med. 2019 Oct 30; 11(516). pii: eaau6296. doi: 10.1126/scitranslmed.aau6296. PMID: 31666402. Read

Loverro KL, Hasselquist L, Lewis CL. Females and males use different hip mechanics in response to symmetric military-relevant loads. Journal of Biomechanics, 2019 Oct 11;95:109280. doi: 10.1016/j.jbiomech. 2019.07.024. PMID: 31405526. Epub 2019 Jul 31. Read

Honkanen MKM, Saukko AEA, Turunen, MJ, Xu W, Lovric G, Honkanen JTJ, Grinstaff MW, Lehto VP, Juha Töyräs J. Triple Contrast CT Method Enables Simultaneous Evaluation of Articular Cartilage Composition and Segmentation. Annals of Biomedical Engineering, 2019 Oct 1;48(2), 556-567. doi 10.1007/s10439-019-02362-6. Read

Munn LL, Nia HT. Mechanosensing tensile solid stresses. Proceedings of National Academy of Sciences, 2019 Oct;116(44):21960-21962. doi: 10.1073/pnas.1916115116. Epub 2019 Oct 16. PMID: 31619566. Read

Shi L, Jiang Y, Lan L, Zhang Y, Huang Y, Cheng JX, Yang C. A Fiber Optoacoustic Emitter with Controlled Ultrasound Frequency for Cell Membrane Sonoporation at Submillimeter Spatial Resolution. arxiv.org/abs/1912.00865, Submitted 2019 Oct. Read

Tashkandi M, Ali F, Alsaqer S, Alhousami T, Cano A, Martin A, Salvador F, Portillo F, C Gerstenfeld L, Goldring MB, Bais MV. Lysyl Oxidase-Like 2 Protects against Progressive and Aging Related Knee Joint Osteoarthritis in Mice. Int J Mol Sci, 2019 Sep 27; 20(19). doi: 10.3390/ijms20194798. PMID: 31569601. Read

Sano S, Wang Y, Yura Y, Sano M, Oshima K, Yang Y, Katanasaka Y, Min KD, Matsuura S, Ravid K, Mohi G, Walsh K. JAK2V617F -Mediated Clonal Hematopoiesis Accelerates Pathological Remodeling in Murine Heart Failure. JACC Basic Transl Sci. 2019 Sept 18; 4(6):684-697. doi: 10.1016/j.jacbts.2019.05.013. PMID: 31709318. Read

Khang A, Rodriguez AG, Schroeder ME, Sansom J, Lejeune E, Anseth KS, Sacks MS. Quantifying Heart Valve Interstitial Cell Contractile State Using Highly Tunable Poly (Ethylene Glycol) Hydrogels. Acta Biomater, 2019 Sep 15;96:354-367. doi: 10.1016/j.actbio.2019.07.010. Epub 2019 Jul 16. PMID: 31323351. Read

He Q, Shumate LT, Matthias J, Divieti-Pajevic et al. A G protein-coupled, IP3/protein kinase C pathway controlling the synthesis of phosphaturic hormone FGF23. JCI Insight. 2019 Sept 5;4(17): e125007. doi:10.1172/jci.insight.125007. PMID: 31484825 Read

Yoon C, Choi C, Mirabella T, Howes C, Dong L, King J, Yang J, Oberai A, Eyckmans J, Chen, CS. Myosin IIA–mediated forces regulate multicellular integrity during vascular sprouting. Molecular Biology of the Cell, 2019 Jul 1;30(16), 1974-1984. PMID: 31318321. Read

Lejeune E, Sacks MS. Analyzing valve interstitial cell mechanics and geometry with spatial statistics. Journal of Biomechanics, 2019 Jul;93, 159-166. doi: 10.1016/j.jbiomech.2019.06.028. PMID: 31383360. Read

Hoffmann GA, Wong JY, Smith ML. On Force and Form: Mechano-Biochemical Regulation of Extracellular Matrix. Biochemistry, 2019 May 30;58,47, 4710-4720. doi: 10.1021/acs.biochem.9b00219. PMID: 31144496. Read

Polacheck WJ, Kutys ML, Tefft J, Chen, CS. Microfabricated blood vessels for modeling the vascular transport barrier. Nature Protocols, 2019 May;14(5), 1425. doi: 10.1038/s41596-019-0144-8. Epub 2019 Apr 5. PMID: 30953042. Read

Graber TG, Fandrey KR, Thompson LV. Novel individualized power training protocol preserves physical function in adult and older mice. Geroscience. 2019, Apr;41(2):165-183. doi: 10.1007/s11357-019-00069-z. Epub 2019 May 10. PMID: 31076998. Read

Nia HT, LL, Jain RK. Mapping physical tumor microenvironment and drug delivery. Clinical Cancer Research, 2019 Apr;25:2024-2026 . doi: 10.1158/1078-0432.CCR-18-3724. Read

Li H, Mattson JM & Zhang Y. Integrating structural heterogeneity, fiber orientation, and recruitment in multiscale ECM mechanics. Journal of the mechanical behavior of biomedical materials, 2019 Apr;92,1-10. doi: 10.1016/j.jmbbm.2018.12.023. Epub 2018 Dec 21. Read

Liu H, Thompson LV. Skeletal muscle denervation investigations: Selecting an experimental control wisely. Am J Physiol Cell Physiol. 2019 Mar 1;316(3):C456-C461. doi: 10.1152/ajpcell.00441.2018. Epub 2019 Jan 9. PMID: 30624984. Read

Lejeune E, Dortdivanlioglu B, Kuhl E, Linder C. Understanding the mechanical link between oriented cell division and cerebellar morphogenesis. Soft matter, 2019 Mar 6;15(10), 2204-2215. doi: 10.1039/c8sm02231c. PMID: 30758032. Read

Bais MV. Impact of Epigenetic Regulation on Head and Neck Squamous Cell Carcinoma. J Dent Res, 2019 Mar; 98(3):268-276. doi: 10.1177/0022034518816947. Epub 2019 Jan 7. PMID: 30615537. Read

Lee MJ, Pickering RT, Shibad V, Wu Y, Karastergiou K, Jager M, Layne MD, Fried SK. Impaired Glucocorticoid Suppression of TGFß Signaling in Human Omental Adipose Tissues Limits Adipogenesis and May Promote Fibrosis. Diabetes, 2019 Mar;68(3):587-597. doi: 10.2337/db18-0955. Epub 2018 Dec 7. PMID: 30530781. Read

Warner MB, Wilson DA, Herrington L, Dixon S, Power C, Jones R, Heller MO, Carden P, Lewis CL. A systematic review of the discriminating biomechanical parameters during the single leg squat. Physical Therapy in Sport, 2019 Mar;36:78-91. doi: 10.1016/j.ptsp.2019.01.007. PMID: 30703642. Read

Sellon B, Azadi M, Oftadeh R, Nia HT, Ghaffari R, Grodzinsky AJ, Freeman DM. Nanoscale Poroelasticity of the Tectorial Membrane Determines Hair Bundle Deflections. Physical Review Letters, 2019 Jan 16;122(2):028101. doi: 10.1103/PhysRevLett.122.028101. PMID: 30720330. Read

2018

Bose P, Eyckmans J, Nguyen TD, Chen CS, Reich DH. The Effects of Geometry on the Mechanics and Alignment of 3D Engineered Microtissues. ACS Biomaterials Science & Engineering, 2018 Dec 7;5(8), 3843-3855. doi:10.1021/acsbiomaterials.8b01183. Read

Kaiser JM, Allaire B, Fein PM, Lu D, Jarraya M, Guermazi A, Demissie S, Samelson EJ, Bouxsein ML, Morgan EF. Correspondence between bone mineral density and intervertebral disc degeneration across age and sex. Archives of Osteoporosis, 2018 Nov 12; 13(1):123. doi: 10.1007/s11657-018-0538-1. PMID: 30421154. Read

Durney KM, Sharifi Kia D, Wang T, Singh A, Karbowski L, Koo HJ, Ateshian GA, Albro MB. Physiologic medium maintains the homeostasis of immature bovine articular cartilage explants in long-term culture. Journal of Biomechanical Engineering, 2018 Nov 1;141. doi: 10.1115/1.4041901. PMID: 30383167. Read

Yu X, Turcotte R, and Zhang Y. Micromechanics of elastic lamellae – Unraveling the role of structural inhomogeneity in multi-scale tissue mechanics. Journal of the Royal Society Interface, 2018 Oct 17;15(147), 20180492. doi: 10.1098/rsif.2018.0492. PMID: 30333250. Read

Connizzo BK, Grodzinsky AJ. Release of Pro-Inflammatory Cytokines from Muscle and Bone Causes Tenocyte Death in a Novel Rotator Cuff In Vitro Explant Culture Model. Connective Tissue Research, 2018 Sep;59(5):423-436. doi: 10.1080/03008207.2018.1439486. Epub 2018 Jun 6. PMID 29447021. Read

Bou Jawde S, Scheuermann A, Bartolák-Suki E, Suki B. The effect of mechanical or electrical stimulation on apnea length in mice. Biomedical Engineering Letters, 2018 Aug;8(3), 329–335. doi:10.1007/s13534-018-0076-1. PMID: 30603217. Read

Kartha VK, Alamoud KA, Sadykov K, Nguyen BC, Laroche F, Feng H, Lee J, Pai SI, Varelas X, Egloff AM, Snyder-Cappione JE, Belkina AC, Bais MV, Monti S, Kukuruzinska MA. Functional and genomic analyses reveal therapeutic potential of targeting ß-catenin/CBP activity in head and neck cancer. Genome Med, 2018 Jul 20;10(1):54. doi: 10.1186/s13073-018-0569-7. PMID: 30029671. Read

Nicholson CJ, Singh K, Saphirstein RJ, Gao YZ, Li Q, Chiu JG, Leavis P, Verwoert GC, Mitchell GF; AortaGen Consortium, Porter T, Morgan KG. Reversal of Aging-Induced Increases in Aortic Stiffness by Targeting Cytoskeletal Protein-Protein Interfaces. J Am Heart Assoc. 2018 Jul 18;7(15). pii: e008926. doi: 10.1161/JAHA.118.008926. PMID: 30021807. Read

Baumann CW, Kwak D, Ferrington DA, Thompson LV. Downhill exercise alters immunoproteasome content in mouse skeletal muscle. Cell Stress and Chaperones, 2018 Jul;23(4):507-517. doi: 10.1007/s12192-017-0857-y. Epub 2017 Nov 9. PMID: 29124664. Read

Lejeune E, Linder C. Modeling mechanical inhomogeneities in small populations of proliferating monolayers and spheroids. Biomechanics and modeling in mechanobiology, 2018 Jun;17(3), 727-743. doi: 10.1007/s10237-017-0989-0. Read

Jager M, Lee MJ, Li C, Farmer SR, Fried SK, Layne MD. Aortic carboxypeptidase-like protein enhances adipose tissue stromal progenitor differentiation into myofibroblasts and is upregulated in fibrotic white adipose tissue. PLoS One. 2018 May 25;13(5). doi: 10.1371/journal.pone.0197777. eCollection 2018. PMID: 29799877. Read

Lejeune E, Linder C. Understanding the relationship between cell death and tissue shrinkage via a stochastic agent-based model. Journal of biomechanics, 2018 May 17;73:9-17. doi: 10.1016/j.jbiomech.2018.03.019. Epub 2018 Mar 17. PMID: 29622482. Read

Kumar D, Wyatt C, Lee S, Okazaki N, Chiba K, Link TM, Souza RB, Majumdar S. Sagittal plane walking patterns are related to MRI changes over 18-months in people with and without mild-moderate hip osteoarthritis. J Orthop Res. 2018 May;36(5):1472-1477. doi: 10.1002/jor.23763. PMID: 29044677. Read

Blackburn PR, Xu Z, Tumelty KE, Zhao RW, Monis WJ, Harris KG, Gass JM, Cousin MA, Boczek NJ, Mitkov MV, Cappel MA, Francomano CA, Parisi JE, Klee EW, Faqeih E, Alkuraya FS, Layne MD, McDonnell NB, Atwal PS. Bi-allelic Alterations in AEBP1 Lead to Defective Collagen Assembly and Connective Tissue Structure Resulting in a Variant of Ehlers-Danlos Syndrome. Am J Hum Genet, 2018 Apr 05;102(4):696-705. doi: 10.1016/j.ajhg.2018.02.018. Epub 2018 Mar 29. PMID: 29606302. Read

Oftadeh R, Connizzo BK, Nia HT, Ortiz C, Grodzinsky AJ. Biological connective tissues exhibit viscoelastic and poroelastic behavior at different frequency regimes: application to tendon and skin biophysics. Acta Biomaterialia. 2018 Apr 1;70:249-259. doi: 10.1016/j.actbio.2018.01.041. Epub 2018 Feb 7. PMID: 29425716. Read

Kim JE, Reynolds DS, Zaman MH, Mak M. Characterization of the mechanical properties of cancer cells in 3D matrices in response to collagen concentration and cytoskeletal inhibitors. Integrative Biology, 2018 Apr;10, 232–241. doi: 10.1039/c8ib00044a. PMID: 29620778. Read

Cooke, ME, Hussein, AI, Lybrand, KE, Wulff, A, Simmons, E, Choi, JH, Litrenta, J, Ricci, WM, Nascone, JW, O’Toole, RV, Morgan, EF, Gerstenfeld, LC. Correlation between RUST assessments of fracture healing to structural and biomechanical properties. Journal of Orthopedic Research. 2018 Mar;36(3):945-53. doi: 10.1002/jor.23710. Epub 2017 Sep 20. PMID: 28833572. Read

Leiva O, Leon C, Kah Ng S, Mangin P, Gachet C, Ravid K. The role of extracellular matrix stiffness in megakaryocyte and platelet development and function. Am J Hematol. 2018 Mar; 93(3):430-441. doi: 10.1002/ajh.25008. Epub 2018 Jan 12. PMID: 29247535. Read

Kohn JC, Azar J, Seta F, Reinhart-King CA. High-Fat, High-Sugar Diet-Induced Subendothelial Matrix Stiffening is Mitigated by Exercise. Cardiovasc Eng Technol. 2018 Mar;9(1):84-93. doi: 10.1007/s13239-017-0335-9. Epub 2017 Nov 20. PMID: 29159794. Read

Huang Y, Jiang Y, Wu O, An X, Chubykin AA, Cheng J-X, Xu X-M, Yang C. Nanoladders Facilitate Directional Axonal Outgrowth and Regeneration. ACS Biomaterials Science and Engineering, 2018 Feb 17;4(3), 1037-1045. DOI: 10.1021/acsbiomaterials.7b0098. Read

Albro MB, Bergholt MS, St-Pierre JP, Vinals Guitart A, Zlotnick H, Stevens MM. (2018) Hyperspectral Raman imaging as a novel tool for quantifying the distribution of biochemical constituents in native and engineered cartilage. NPJ Regenerative Medicine, 2018 Feb 9;3:3. doi: 10.1038/s41536-018-0042-7. PMID: 29449966. Read

Hussein AI, Louzeiro DT, Unnikrishnan GU, Morgan EF. Differences in Trabecular Microarchitecture and Simplified Boundary Conditions Limit the Accuracy of Quantitative Computed Tomography-Based Finite Element Models of Vertebral Failure. Journal of Biomechanical Engineering, 2018 Feb 1;140(2). doi: 10.1115/1.4038609. PMID: 29196764. Read

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